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Genome-wide association study of N370S homozygous Gaucher disease reveals the candidacy of CLN8 gene as a genetic modifier contributing to extreme phenotypic variation

机译:N370S纯合性高雪氏病的全基因组关联研究揭示了CLN8基因作为候选极端表型变异的遗传修饰子的候选资格

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摘要

Mutations in GBA1 gene result in defective acid beta-glucosidase and the complex phenotype of Gaucher disease (GD) related to the accumulation of glucosylceramide-laden macrophages. The phenotype is highly variable even among patients harboring identical GBA1 mutations. We hypothesize that modifier gene(s) underlie phenotypic diversity in GD and performed a GWAS study in Ashkenazi Jewish patients with type 1 GD (GD1), homozygous for N370S mutation. Patients were assigned to mild, moderate, or severe disease categories using composite disease severity scoring systems. Whole-genome genotyping for >500,000 SNPs was performed to search for association signals using OQLS algorithm in 139 eligible patients. Several SNPs in linkage disequilibrium within the CLN8 gene locus were associated with the GD1 severity: SNP rs11986414 was associated with GD1 severity at P value 1.26 x 10-(6). Compared to mild disease, risk allele A at rs11986414 conferred an odds ratio of 3.72 for moderate/severe disease. Loss of function mutations in CLN8 causes neuronal ceroid-lipofuscinosis, but our results indicate that its increased expression may protect against severe GD1. In cultured skin fibroblasts, the relative expression of CLN8 was higher in mild GD compared to severely affected patients, in whom CLN8 risk alleles were overrepresented. In an in vitro cell model of GD, CLN8 expression was increased, which was further enhanced in the presence of bioactive substrate, glucosylsphingosine. Taken together, CLN8 is a candidate modifier gene for GD1 that may function as a protective sphingolipid sensor and/or in glycosphingolipid trafficking. Future studies should explore the role of CLN8 in pathophysiology of GD. Am. J. Hematol., 2012. (C) 2012 Wiley Periodicals, Inc
机译:GBA1基因中的突变会导致酸性β-葡萄糖苷酶缺陷以及高雪氏病(GD)的复杂表型,该现象与葡萄糖基神经酰胺负载的巨噬细胞的积累有关。即使在具有相同GBA1突变的患者中,该表型也是高度可变的。我们假设修饰基因在GD表型多样性的基础上,并在纯合N370S突变的1型GD(GD1)的Ashkenazi犹太患者中进行了GWAS研究。使用综合疾病严重程度评分系统将患者分为轻度,中度或重度疾病类别。使用OQLS算法对139例合格患者进行了> 500,000个SNP的全基因组基因分型,以寻找关联信号。 CLN8基因位点内连锁不平衡中的几个SNP与GD1严重程度相关:SNP rs11986414与GD1严重程度相关,P值为1.26 x 10-(6)。与轻度疾病相比,风险等位基因A在rs11986414处的中度/重度疾病比值比为3.72。 CLN8中功能突变的缺失会导致神经元类脂褐藻病,但我们的结果表明其表达增加可能会预防严重的GD1。在培养的皮肤成纤维细胞中,轻度GD患者中CLN8的相对表达高于重度感染CLN8等位基因的严重患者。在GD的体外细胞模型中,CLN8表达增加,在存在生物活性底物葡萄糖基鞘氨醇的情况下,CLN8表达进一步增强。综上所述,CLN8是GD1的候选修饰基因,可作为保护性鞘脂传感器和/或在鞘糖脂运输中发挥作用。未来的研究应探讨CLN8在GD病理生理中的作用。上午。 J. Hematol。,2012。(C)2012 Wiley Periodicals,Inc

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